CenGEN
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Thresholding_sc
Thresholding_sc PublicSelecting a threshold for calling gene expression in single-cell data
R 1
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connectivity_analysis
connectivity_analysis PublicHypothesis testing the genetic basis of the connectome
MATLAB
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Initial_single_cell_analysis
Initial_single_cell_analysis PublicCell calling and background correction on individual single-cell experiments
R
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Repositories
- L1_dataset_analysis Public
Sample scripts for analyses of single-cell RNA Seq data from the L1 C. elegans nervous system
- CengenApp Public
- CeNGEN_integrated_analysis_2024 Public
Github repo for the 2024 CeNGEN manuscript detailing our work analyzing gene expression data from FACS sorted C. elegans neurons, integrating data from both bulk and single cell RNA-seq methods
- regression_exon_skipping Public
- suppa_events Public
- stringtie_quantif Public
- quantif_exon_skipping Public
- reanalysis_tissue Public
- isoform_compare Public
- das_by_neuron Public
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